BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C10LP1|AL428701
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig628 1640 0.0
>3x_Contig628
Length = 1864
Score = 1640 bits (826), Expect = 0.0
Identities = 831/834 (99%)
Strand = Plus / Minus
Query: 56 atattactttccaaatatttgatgtatttttgcttgaaagatttattatcagcaggaaga 115
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1859 atattactttccaaatatttgatgtatttttgcttcaaagatttattatcagcaggaaga 1800
Query: 116 gcccggagtgctctttcaaacaaggggaacgtacattcgggaccaaaagtcctttcagtc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 gcccggagtgctctttcaaacaaggggaacgtacattcgggaccaaaagtcctttcagtc 1740
Query: 176 cagtcaatataggctccccagaaatattcgtatcttaaacatggaatcaaacatctctca 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 cagtcaatataggctccccagaaatattcgtatcttaaacatggaatcaaacatctctca 1680
Query: 236 aacgtcgattttattaattctgtactgaactcagtgttgttgattaagaaagatagataa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 aacgtcgattttattaattctgtactgaactcagtgttgttgattaagaaagatagataa 1620
Query: 296 gcatcccaattctgaatctcattctcgggaagctcagggatattgaaaaatggctgtttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 gcatcccaattctgaatctcattctcgggaagctcagggatattgaaaaatggctgtttt 1560
Query: 356 atttgtgattcatatgtccatattttgttcaccttctcctggttagaaataaatgtggta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 atttgtgattcatatgtccatattttgttcaccttctcctggttagaaataaatgtggta 1500
Query: 416 tccaaatggatgcttgattccctattagcaaactctgggtgatattccaagaattcctta 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 tccaaatggatgcttgattccctattagcaaactctgggtgatattccaagaattcctta 1440
Query: 476 aagctggtgtagtatcttgcatattgatgcaaaggttgctgcatgacttgtttgtacacc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 aagctggtgtagtatcttgcatattgatgcaaaggttgctgcatgacttgtttgtacacc 1380
Query: 536 tcaaatacgttttcccagttctgtagtcttgtttcatatgcmatgtgcttatcccaaata 595
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1379 tcaaatacgttttcccagttctgtagtcttgtttcatatgcaatgtgcttatcccaaata 1320
Query: 596 tcgtgcgagaggaaatgagatcccacgagggattcgcatttcctgaactggtttcgtatc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 tcgtgcgagaggaaatgagatcccacgagggattcgcatttcctgaactggtttcgtatc 1260
Query: 656 agttcactatcattctgattatgtgttagataaacgttcaacatatcaatccaaagatct 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 agttcactatcattctgattatgtgttagataaacgttcaacatatcaatccaaagatct 1200
Query: 716 atcgacgtagggaacgaatgtwaagatgcctttaaagtagaaatagacccttctaatcca 775
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 atcgacgtagggaacgaatgtaaagatgcctttaaagtagaaatagacccttctaatcca 1140
Query: 776 tctagctgatatttcaccgcaacgtatcgtttccagtaaccaaaaaataacggatacctt 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 tctagctgatatttcaccgcaacgtatcgtttccagtaaccaaaaaataacggatacctt 1080
Query: 836 cccaataactcatcaaaaactttatatatattgctcttcacatgttcattggga 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 cccaataactcatcaaaaactttatatatattgctcttcacatgttcattggga 1026
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6973
Number of Sequences: 1807
Number of extensions: 6973
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)